Welcome to PHYLOViZ’s documentation!

PHYLOViZ is a platform independent JAVA software that allows the analysis of sequence-based typing methods that generate allelic profiles and their associated epidemiological data.

• Download and install
  • Binaries
  • Source
• Loading data
  • File formats
  • Loading a Dataset
  • Loading a remote Dataset
• Data analysis
  • goeBURST algorithm
  • goeBURST Full MST algorithm
  • Hierarchical Clustering
  • Neighbor Joinning
• Display and visualization
  • Interface features
  • Color conventions
• Querying and visualizing the data
  • The isolate data tab
  • The typing data tab
  • Regular expression primer
  • Queries using the table view
  • Queries using the tree view
  • Exporting the results to an image file
• Project management
  • Saving
  • Loading